scOrange Workflows
General Preprocessing
Loads the data, annotates it and filters it. The Single Cell Preprocesses widget normalises and log-transforms the samples, additionally it can be used to select the most variable genes or to standardize them. Such data can be further analysed.
Annotating Data
Load your data with the Load Data widget, feed it to the Genes widget to recognise and annotate the genes in your dataset employing the NCBI Entrez database. Create a new class attribute and group the samples according to their annotation using the Create Class widget.
