scOrange Workflows

Clustering and t-SNE

Load the data, cluster, and explore the clustering structure in the t-SNE embedding. Select a subset of cells in the embedding to examine their type in the Box Plot.


Pinpointing Lineage Differentiation in Human Preimplantation Embryotic Cells

Pinpoint the time of trophectoderm (TE) and inner cell mass (ICM) differentiation in human preimplantation embryotic cells.