By: Iva Černoša, Apr 1, 2019
Importing and Using Your Own Marker Genes
If you ever felt limited by the Marker Gene widget, here you can discover how to bypass it by importing your own marker genes and using them to score your dataset
scOrange Blog
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Categories:
- clustering
- t-sne
- marker-genes
- tsne
- annotator
- data-mining
- embedding
- embryo
- genomics
- markers
By: Iva Černoša, Mar 29, 2019
Clustering Cells in Mouse Pancreas
To reproduce a part of a study by Baron et al. (Cell Systems, 2016), we cluster mouse pancreatic cells and identify marker genes for each type of the cells.
By: Martin Stražar, Nov 23, 2018
Exploring the Fruit Fly Olfactory System
Explore different subsets of cells and related them to known biological processes.
By: Martin Stražar, Oct 23, 2018
scOrange representing the FAIR principles in bioinformatics
scOrange's away trip to Genova.
