scOrange Workflows

Importing and Using Your Own Marker Genes

Enables you importation of your own marker genes in .tab format.

Clustering Cells in Mouse Pancreas

This workflow clusters pancreatic cells from two mouse strains and identifies marker genes for each subpopulation of the cells.

Pinpointing Lineage Differentiation in Human Preimplantation Embryotic Cells

Pinpoint the time of trophectoderm (TE) and inner cell mass (ICM) differentiation in human preimplantation embryotic cells.

X And Y Chromosome Expression in Human Preimplantation Embryos

Submerge yourself into the field of checkpoint blockade immunotherapy by identifying subsets of exhausted CD8+ T cells during chronic viral infections and corresponding groups in T cells isolated from tumours.