scOrange Workflows

Annotating Data

Load your data with the Load Data widget, feed it to the Genes widget to recognise and annotate the genes in your dataset employing NCBI Entrez database. Create a new class attribute and group the samples according to their annotation using Create Class widget.

Subsets of Exhausted CD8+ T Cells

Submerge yourself into the field of checkpoint blockade immunotherapy by identifying subsets of exhausted CD8+ T cells during chronic viral infections and corresponding groups in T cells isolated from tumours.