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23 November / / cell scoring / clustering / t-SNE / markers
Single-cell RNA sequencing is all about exploring cell subpopulations and their distinguishing properties. In this blog, you will learn how to automatically select subset of cells based on different criteria, including generating own scores. Different subsets will then be explored using previously known, as well as newly discovered marker genes. We will work the brain cells from Drosophila melanogaster - a fruit fly, published in the study if Li et. al (2017).